fix: issue https://github.com/infiniflow/ragflow/issues/5600

### What problem does this PR solve?

close issue https://github.com/infiniflow/ragflow/issues/5600 

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

Refactored DocumentService.update_progress

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#5600

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

close issue #5600 

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

Signed-off-by: yihong0618 <zouzou0208@gmail.com>

### What problem does this PR solve?

Fix nursery.start_soon. Close #5575

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

Made task_executor async to speedup parsing

### Type of change

- [x] Performance Improvement

### What problem does this PR solve?

#5289
### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#5314

### Type of change

- [x] Performance Improvement

### What problem does this PR solve?

#5152

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#5107

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#5061
#5067

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#4946

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#5015

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#4995

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#4831

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?


### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?


### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#4728

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

### Type of change

- [x] Refactoring

### What problem does this PR solve?


### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#4633

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#4543

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)
- [x] Refactoring

### What problem does this PR solve?

#4543

### Type of change

- [x] New Feature (non-breaking change which adds functionality)

### What problem does this PR solve?

#4367

### Type of change

- [x] New Feature (non-breaking change which adds functionality)

### What problem does this PR solve?

### Type of change

- [x] Refactoring

### What problem does this PR solve?

#4180

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#4126
### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#4045

### Type of change

- [x] New Feature (non-breaking change which adds functionality)

### What problem does this PR solve?

#4045

### Type of change

- [x] New Feature (non-breaking change which adds functionality)

### What problem does this PR solve?

Rename page_num_list, top_list, position_list to page_num_int, top_int,
position_int

### Type of change

- [x] Refactoring

### What problem does this PR solve?

Added static check at PR CI

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)
- [x] Refactoring

### What problem does this PR solve?

Fix errors detected by Ruff

### Type of change

- [x] Refactoring

### What problem does this PR solve?

Fix graphrag + infinity bugs

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#3646

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#3538

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

1. Remove unused code
2. Fix type mismatch, in nlp search and infinity search interface
3. Fix chunk list, get all chunks of this user.

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

---------

Signed-off-by: jinhai <haijin.chn@gmail.com>

### What problem does this PR solve?

leiden alg throws exception for lack func cast definition

### Type of change

- Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

Fix logs. Use dict.pop instead of del.

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

Introduced [beartype](https://github.com/beartype/beartype) for runtime
type-checking.

### Type of change

- [x] New Feature (non-breaking change which adds functionality)

### What problem does this PR solve?

#3426

### Type of change

- [x] New Feature (non-breaking change which adds functionality)

### What problem does this PR solve?

1. Module init won't connect database any more.
2. Config in settings need to be used with settings.CONFIG_NAME

### Type of change

- [x] Refactoring

Signed-off-by: jinhai <haijin.chn@gmail.com>

### What problem does this PR solve?

Use consistent log file names, introduced initLogger

### Type of change

- [ ] Bug Fix (non-breaking change which fixes an issue)
- [ ] New Feature (non-breaking change which adds functionality)
- [ ] Documentation Update
- [x] Refactoring
- [ ] Performance Improvement
- [ ] Other (please describe):

Unified all log files into one.

### What problem does this PR solve?

Unified all log files into one.

### Type of change

- [x] Refactoring

### What problem does this PR solve?

Integration with Infinity

- Replaced ELASTICSEARCH with dataStoreConn
- Renamed deleteByQuery with delete
- Renamed bulk to upsertBulk
- getHighlight, getAggregation
- Fix KGSearch.search
- Moved Dealer.sql_retrieval to es_conn.py


### Type of change

- [x] Refactoring

### What problem does this PR solve?

#3299

### Type of change

- [x] Performance Improvement

### What problem does this PR solve?

#3273

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

#3151

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

### What problem does this PR solve?

1. fix: mid map show error in knowledge graph, juse because
```@antv/g6```version changed
2. feat: concurrent threads configuration support in graph extractor
3. fix: used tokens update failed for tenant
4. feat: timeout configuration support for llm
5. fix: regex error in graph extractor
6. feat: qwen rerank(```gte-rerank```) support
7. fix: timeout deal in knowledge graph index process. Now chat by
stream output, also, it is configuratable.
8. feat: ```qwen-long``` model configuration

### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)
- [x] New Feature (non-breaking change which adds functionality)

---------

Co-authored-by: chongchuanbing <chongchuanbing@gmail.com>
Co-authored-by: Kevin Hu <kevinhu.sh@gmail.com>

### What problem does this PR solve?

### Type of change

- [x] Refactoring