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task_executor.py 11KB

1 vuosi sitten
1 vuosi sitten
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  1. #
  2. # Copyright 2024 The InfiniFlow Authors. All Rights Reserved.
  3. #
  4. # Licensed under the Apache License, Version 2.0 (the "License");
  5. # you may not use this file except in compliance with the License.
  6. # You may obtain a copy of the License at
  7. #
  8. # http://www.apache.org/licenses/LICENSE-2.0
  9. #
  10. # Unless required by applicable law or agreed to in writing, software
  11. # distributed under the License is distributed on an "AS IS" BASIS,
  12. # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  13. # See the License for the specific language governing permissions and
  14. # limitations under the License.
  15. #
  16. import datetime
  17. import json
  18. import logging
  19. import os
  20. import hashlib
  21. import copy
  22. import re
  23. import sys
  24. import time
  25. import traceback
  26. from functools import partial
  27. from rag.utils import MINIO
  28. from api.db.db_models import close_connection
  29. from rag.settings import database_logger
  30. from rag.settings import cron_logger, DOC_MAXIMUM_SIZE
  31. from multiprocessing import Pool
  32. import numpy as np
  33. from elasticsearch_dsl import Q
  34. from multiprocessing.context import TimeoutError
  35. from api.db.services.task_service import TaskService
  36. from rag.utils import ELASTICSEARCH
  37. from timeit import default_timer as timer
  38. from rag.utils import rmSpace, findMaxTm
  39. from rag.nlp import search
  40. from io import BytesIO
  41. import pandas as pd
  42. from rag.app import laws, paper, presentation, manual, qa, table, book, resume, picture, naive, one
  43. from api.db import LLMType, ParserType
  44. from api.db.services.document_service import DocumentService
  45. from api.db.services.llm_service import LLMBundle
  46. from api.utils.file_utils import get_project_base_directory
  47. from rag.utils.redis_conn import REDIS_CONN
  48. BATCH_SIZE = 64
  49. FACTORY = {
  50. "general": naive,
  51. ParserType.NAIVE.value: naive,
  52. ParserType.PAPER.value: paper,
  53. ParserType.BOOK.value: book,
  54. ParserType.PRESENTATION.value: presentation,
  55. ParserType.MANUAL.value: manual,
  56. ParserType.LAWS.value: laws,
  57. ParserType.QA.value: qa,
  58. ParserType.TABLE.value: table,
  59. ParserType.RESUME.value: resume,
  60. ParserType.PICTURE.value: picture,
  61. ParserType.ONE.value: one,
  62. }
  63. def set_progress(task_id, from_page=0, to_page=-1,
  64. prog=None, msg="Processing..."):
  65. if prog is not None and prog < 0:
  66. msg = "[ERROR]" + msg
  67. cancel = TaskService.do_cancel(task_id)
  68. if cancel:
  69. msg += " [Canceled]"
  70. prog = -1
  71. if to_page > 0:
  72. if msg:
  73. msg = f"Page({from_page+1}~{to_page+1}): " + msg
  74. d = {"progress_msg": msg}
  75. if prog is not None:
  76. d["progress"] = prog
  77. try:
  78. TaskService.update_progress(task_id, d)
  79. except Exception as e:
  80. cron_logger.error("set_progress:({}), {}".format(task_id, str(e)))
  81. if cancel:
  82. sys.exit()
  83. def collect(comm, mod, tm):
  84. tasks = TaskService.get_tasks(tm, mod, comm)
  85. #print(tasks)
  86. if len(tasks) == 0:
  87. time.sleep(1)
  88. return pd.DataFrame()
  89. tasks = pd.DataFrame(tasks)
  90. mtm = tasks["update_time"].max()
  91. cron_logger.info("TOTAL:{}, To:{}".format(len(tasks), mtm))
  92. return tasks
  93. def get_minio_binary(bucket, name):
  94. global MINIO
  95. if REDIS_CONN.is_alive():
  96. try:
  97. r = REDIS_CONN.get("{}/{}".format(bucket, name))
  98. if r: return r
  99. except Exception as e:
  100. cron_logger.warning("Get redis[EXCEPTION]:" + str(e))
  101. return MINIO.get(bucket, name)
  102. def build(row):
  103. if row["size"] > DOC_MAXIMUM_SIZE:
  104. set_progress(row["id"], prog=-1, msg="File size exceeds( <= %dMb )" %
  105. (int(DOC_MAXIMUM_SIZE / 1024 / 1024)))
  106. return []
  107. callback = partial(
  108. set_progress,
  109. row["id"],
  110. row["from_page"],
  111. row["to_page"])
  112. chunker = FACTORY[row["parser_id"].lower()]
  113. pool = Pool(processes=1)
  114. try:
  115. st = timer()
  116. thr = pool.apply_async(get_minio_binary, args=(row["kb_id"], row["location"]))
  117. binary = thr.get(timeout=90)
  118. pool.terminate()
  119. cron_logger.info(
  120. "From minio({}) {}/{}".format(timer()-st, row["location"], row["name"]))
  121. cks = chunker.chunk(row["name"], binary=binary, from_page=row["from_page"],
  122. to_page=row["to_page"], lang=row["language"], callback=callback,
  123. kb_id=row["kb_id"], parser_config=row["parser_config"], tenant_id=row["tenant_id"])
  124. cron_logger.info(
  125. "Chunkking({}) {}/{}".format(timer()-st, row["location"], row["name"]))
  126. except TimeoutError as e:
  127. callback(-1, f"Internal server error: Fetch file timeout. Could you try it again.")
  128. cron_logger.error(
  129. "Chunkking {}/{}: Fetch file timeout.".format(row["location"], row["name"]))
  130. return
  131. except Exception as e:
  132. if re.search("(No such file|not found)", str(e)):
  133. callback(-1, "Can not find file <%s>" % row["name"])
  134. else:
  135. callback(-1, f"Internal server error: %s" %
  136. str(e).replace("'", ""))
  137. pool.terminate()
  138. traceback.print_exc()
  139. cron_logger.error(
  140. "Chunkking {}/{}: {}".format(row["location"], row["name"], str(e)))
  141. return
  142. docs = []
  143. doc = {
  144. "doc_id": row["doc_id"],
  145. "kb_id": [str(row["kb_id"])]
  146. }
  147. el = 0
  148. for ck in cks:
  149. d = copy.deepcopy(doc)
  150. d.update(ck)
  151. md5 = hashlib.md5()
  152. md5.update((ck["content_with_weight"] +
  153. str(d["doc_id"])).encode("utf-8"))
  154. d["_id"] = md5.hexdigest()
  155. d["create_time"] = str(datetime.datetime.now()).replace("T", " ")[:19]
  156. d["create_timestamp_flt"] = datetime.datetime.now().timestamp()
  157. if not d.get("image"):
  158. docs.append(d)
  159. continue
  160. output_buffer = BytesIO()
  161. if isinstance(d["image"], bytes):
  162. output_buffer = BytesIO(d["image"])
  163. else:
  164. d["image"].save(output_buffer, format='JPEG')
  165. st = timer()
  166. MINIO.put(row["kb_id"], d["_id"], output_buffer.getvalue())
  167. el += timer() - st
  168. d["img_id"] = "{}-{}".format(row["kb_id"], d["_id"])
  169. del d["image"]
  170. docs.append(d)
  171. cron_logger.info("MINIO PUT({}):{}".format(row["name"], el))
  172. return docs
  173. def init_kb(row):
  174. idxnm = search.index_name(row["tenant_id"])
  175. if ELASTICSEARCH.indexExist(idxnm):
  176. return
  177. return ELASTICSEARCH.createIdx(idxnm, json.load(
  178. open(os.path.join(get_project_base_directory(), "conf", "mapping.json"), "r")))
  179. def embedding(docs, mdl, parser_config={}, callback=None):
  180. batch_size = 32
  181. tts, cnts = [rmSpace(d["title_tks"]) for d in docs if d.get("title_tks")], [
  182. re.sub(r"</?(table|td|caption|tr|th)( [^<>]{0,12})?>", " ", d["content_with_weight"]) for d in docs]
  183. tk_count = 0
  184. if len(tts) == len(cnts):
  185. tts_ = np.array([])
  186. for i in range(0, len(tts), batch_size):
  187. vts, c = mdl.encode(tts[i: i + batch_size])
  188. if len(tts_) == 0:
  189. tts_ = vts
  190. else:
  191. tts_ = np.concatenate((tts_, vts), axis=0)
  192. tk_count += c
  193. callback(prog=0.6 + 0.1 * (i + 1) / len(tts), msg="")
  194. tts = tts_
  195. cnts_ = np.array([])
  196. for i in range(0, len(cnts), batch_size):
  197. vts, c = mdl.encode(cnts[i: i + batch_size])
  198. if len(cnts_) == 0:
  199. cnts_ = vts
  200. else:
  201. cnts_ = np.concatenate((cnts_, vts), axis=0)
  202. tk_count += c
  203. callback(prog=0.7 + 0.2 * (i + 1) / len(cnts), msg="")
  204. cnts = cnts_
  205. title_w = float(parser_config.get("filename_embd_weight", 0.1))
  206. vects = (title_w * tts + (1 - title_w) *
  207. cnts) if len(tts) == len(cnts) else cnts
  208. assert len(vects) == len(docs)
  209. for i, d in enumerate(docs):
  210. v = vects[i].tolist()
  211. d["q_%d_vec" % len(v)] = v
  212. return tk_count
  213. def main(comm, mod):
  214. tm_fnm = os.path.join(
  215. get_project_base_directory(),
  216. "rag/res",
  217. f"{comm}-{mod}.tm")
  218. tm = findMaxTm(tm_fnm)
  219. rows = collect(comm, mod, tm)
  220. if len(rows) == 0:
  221. return
  222. tmf = open(tm_fnm, "a+")
  223. for _, r in rows.iterrows():
  224. callback = partial(set_progress, r["id"], r["from_page"], r["to_page"])
  225. #callback(random.random()/10., "Task has been received.")
  226. try:
  227. embd_mdl = LLMBundle(r["tenant_id"], LLMType.EMBEDDING, llm_name=r["embd_id"], lang=r["language"])
  228. except Exception as e:
  229. traceback.print_stack(e)
  230. callback(prog=-1, msg=str(e))
  231. continue
  232. st = timer()
  233. cks = build(r)
  234. cron_logger.info("Build chunks({}): {}".format(r["name"], timer()-st))
  235. if cks is None:
  236. continue
  237. if not cks:
  238. tmf.write(str(r["update_time"]) + "\n")
  239. callback(1., "No chunk! Done!")
  240. continue
  241. # TODO: exception handler
  242. ## set_progress(r["did"], -1, "ERROR: ")
  243. callback(
  244. msg="Finished slicing files(%d). Start to embedding the content." %
  245. len(cks))
  246. st = timer()
  247. try:
  248. tk_count = embedding(cks, embd_mdl, r["parser_config"], callback)
  249. except Exception as e:
  250. callback(-1, "Embedding error:{}".format(str(e)))
  251. cron_logger.error(str(e))
  252. tk_count = 0
  253. cron_logger.info("Embedding elapsed({}): {}".format(r["name"], timer()-st))
  254. callback(msg="Finished embedding({})! Start to build index!".format(timer()-st))
  255. init_kb(r)
  256. chunk_count = len(set([c["_id"] for c in cks]))
  257. st = timer()
  258. es_r = ELASTICSEARCH.bulk(cks, search.index_name(r["tenant_id"]))
  259. cron_logger.info("Indexing elapsed({}): {}".format(r["name"], timer()-st))
  260. if es_r:
  261. callback(-1, "Index failure!")
  262. ELASTICSEARCH.deleteByQuery(
  263. Q("match", doc_id=r["doc_id"]), idxnm=search.index_name(r["tenant_id"]))
  264. cron_logger.error(str(es_r))
  265. else:
  266. if TaskService.do_cancel(r["id"]):
  267. ELASTICSEARCH.deleteByQuery(
  268. Q("match", doc_id=r["doc_id"]), idxnm=search.index_name(r["tenant_id"]))
  269. continue
  270. callback(1., "Done!")
  271. DocumentService.increment_chunk_num(
  272. r["doc_id"], r["kb_id"], tk_count, chunk_count, 0)
  273. cron_logger.info(
  274. "Chunk doc({}), token({}), chunks({}), elapsed:{}".format(
  275. r["id"], tk_count, len(cks), timer()-st))
  276. tmf.write(str(r["update_time"]) + "\n")
  277. tmf.close()
  278. if __name__ == "__main__":
  279. peewee_logger = logging.getLogger('peewee')
  280. peewee_logger.propagate = False
  281. peewee_logger.addHandler(database_logger.handlers[0])
  282. peewee_logger.setLevel(database_logger.level)
  283. #from mpi4py import MPI
  284. #comm = MPI.COMM_WORLD
  285. while True:
  286. main(int(sys.argv[2]), int(sys.argv[1]))
  287. close_connection()