 Fix "File contains no valid workbook part" (#9360)
### What problem does this PR solve?
fix "File contains no valid workbook part"
stacktrace:
```
Traceback (most recent call last):
  File "/ragflow/deepdoc/parser/excel_parser.py", line 54, in _load_excel_to_workbook
    return RAGFlowExcelParser._dataframe_to_workbook(df)
  File "/ragflow/deepdoc/parser/excel_parser.py", line 69, in _dataframe_to_workbook
    ws.cell(row=row_num, column=col_num, value=value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/worksheet/worksheet.py", line 246, in cell
    cell.value = value
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 218, in value
    self._bind_value(value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 197, in _bind_value
    value = self.check_string(value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 165, in check_string
    raise IllegalCharacterError(f"{value} cannot be used in worksheets.")
```
### Type of change
- [x] Bug Fix (non-breaking change which fixes an issue)
- [ ] New Feature (non-breaking change which adds functionality)
- [ ] Documentation Update
- [ ] Refactoring
- [ ] Performance Improvement
- [ ] Other (please describe): 2 månader sedan      Fix "File contains no valid workbook part" (#9360)
### What problem does this PR solve?
fix "File contains no valid workbook part"
stacktrace:
```
Traceback (most recent call last):
  File "/ragflow/deepdoc/parser/excel_parser.py", line 54, in _load_excel_to_workbook
    return RAGFlowExcelParser._dataframe_to_workbook(df)
  File "/ragflow/deepdoc/parser/excel_parser.py", line 69, in _dataframe_to_workbook
    ws.cell(row=row_num, column=col_num, value=value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/worksheet/worksheet.py", line 246, in cell
    cell.value = value
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 218, in value
    self._bind_value(value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 197, in _bind_value
    value = self.check_string(value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 165, in check_string
    raise IllegalCharacterError(f"{value} cannot be used in worksheets.")
```
### Type of change
- [x] Bug Fix (non-breaking change which fixes an issue)
- [ ] New Feature (non-breaking change which adds functionality)
- [ ] Documentation Update
- [ ] Refactoring
- [ ] Performance Improvement
- [ ] Other (please describe): 2 månader sedan                  Add fallback to use 'calamine' parse engine in excel_parser.py (#9374)
### What problem does this PR solve?
add fallback to `calamine` engine when parse error raised using the
default `openpyxl` / `xlrd` engine.
e.g. the following error can be fixed:
```
Traceback (most recent call last):
  File "/ragflow/deepdoc/parser/excel_parser.py", line 53, in _load_excel_to_workbook
    df = pd.read_excel(file_like_object)
  File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 495, in read_excel
    io = ExcelFile(
  File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 1567, in __init__
    self._reader = self._engines[engine](
  File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 46, in __init__
    super().__init__(
  File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 573, in __init__
    self.book = self.load_workbook(self.handles.handle, engine_kwargs)
  File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 63, in load_workbook
    return open_workbook(file_contents=data, **engine_kwargs)
  File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/__init__.py", line 172, in open_workbook
    bk = open_workbook_xls(
  File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 68, in open_workbook_xls
    bk.biff2_8_load(
  File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 641, in biff2_8_load
    cd.locate_named_stream(UNICODE_LITERAL(qname))
  File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 398, in locate_named_stream
    result = self._locate_stream(
  File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 429, in _locate_stream
    raise CompDocError("%s corruption: seen[%d] == %d" % (qname, s, self.seen[s]))
xlrd.compdoc.CompDocError: Workbook corruption: seen[2] == 4
```
### Type of change
- [x] Bug Fix (non-breaking change which fixes an issue) 2 månader sedan         Fix "File contains no valid workbook part" (#9360)
### What problem does this PR solve?
fix "File contains no valid workbook part"
stacktrace:
```
Traceback (most recent call last):
  File "/ragflow/deepdoc/parser/excel_parser.py", line 54, in _load_excel_to_workbook
    return RAGFlowExcelParser._dataframe_to_workbook(df)
  File "/ragflow/deepdoc/parser/excel_parser.py", line 69, in _dataframe_to_workbook
    ws.cell(row=row_num, column=col_num, value=value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/worksheet/worksheet.py", line 246, in cell
    cell.value = value
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 218, in value
    self._bind_value(value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 197, in _bind_value
    value = self.check_string(value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 165, in check_string
    raise IllegalCharacterError(f"{value} cannot be used in worksheets.")
```
### Type of change
- [x] Bug Fix (non-breaking change which fixes an issue)
- [ ] New Feature (non-breaking change which adds functionality)
- [ ] Documentation Update
- [ ] Refactoring
- [ ] Performance Improvement
- [ ] Other (please describe): 2 månader sedan           Fix "File contains no valid workbook part" (#9360)
### What problem does this PR solve?
fix "File contains no valid workbook part"
stacktrace:
```
Traceback (most recent call last):
  File "/ragflow/deepdoc/parser/excel_parser.py", line 54, in _load_excel_to_workbook
    return RAGFlowExcelParser._dataframe_to_workbook(df)
  File "/ragflow/deepdoc/parser/excel_parser.py", line 69, in _dataframe_to_workbook
    ws.cell(row=row_num, column=col_num, value=value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/worksheet/worksheet.py", line 246, in cell
    cell.value = value
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 218, in value
    self._bind_value(value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 197, in _bind_value
    value = self.check_string(value)
  File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 165, in check_string
    raise IllegalCharacterError(f"{value} cannot be used in worksheets.")
```
### Type of change
- [x] Bug Fix (non-breaking change which fixes an issue)
- [ ] New Feature (non-breaking change which adds functionality)
- [ ] Documentation Update
- [ ] Refactoring
- [ ] Performance Improvement
- [ ] Other (please describe): 2 månader sedan                                                     | 
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                        - #  Licensed under the Apache License, Version 2.0 (the "License");
 - #  you may not use this file except in compliance with the License.
 - #  You may obtain a copy of the License at
 - #
 - #      http://www.apache.org/licenses/LICENSE-2.0
 - #
 - #  Unless required by applicable law or agreed to in writing, software
 - #  distributed under the License is distributed on an "AS IS" BASIS,
 - #  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 - #  See the License for the specific language governing permissions and
 - #  limitations under the License.
 - #
 - 
 - import logging
 - import re
 - import sys
 - from io import BytesIO
 - 
 - import pandas as pd
 - from openpyxl import Workbook, load_workbook
 - 
 - from rag.nlp import find_codec
 - 
 - # copied from `/openpyxl/cell/cell.py`
 - ILLEGAL_CHARACTERS_RE = re.compile(r'[\000-\010]|[\013-\014]|[\016-\037]')
 - 
 - class RAGFlowExcelParser:
 - 
 -     @staticmethod
 -     def _load_excel_to_workbook(file_like_object):
 -         if isinstance(file_like_object, bytes):
 -             file_like_object = BytesIO(file_like_object)
 - 
 -         # Read first 4 bytes to determine file type
 -         file_like_object.seek(0)
 -         file_head = file_like_object.read(4)
 -         file_like_object.seek(0)
 - 
 -         if not (file_head.startswith(b'PK\x03\x04') or file_head.startswith(b'\xD0\xCF\x11\xE0')):
 -             logging.info("Not an Excel file, converting CSV to Excel Workbook")
 - 
 -             try:
 -                 file_like_object.seek(0)
 -                 df = pd.read_csv(file_like_object)
 -                 return RAGFlowExcelParser._dataframe_to_workbook(df)
 - 
 -             except Exception as e_csv:
 -                 raise Exception(f"Failed to parse CSV and convert to Excel Workbook: {e_csv}")
 - 
 -         try:
 -             return load_workbook(file_like_object,data_only= True)
 -         except Exception as e:
 -             logging.info(f"openpyxl load error: {e}, try pandas instead")
 -             try:
 -                 file_like_object.seek(0)
 -                 try:
 -                     df = pd.read_excel(file_like_object)
 -                     return RAGFlowExcelParser._dataframe_to_workbook(df)
 -                 except Exception as ex:
 -                     logging.info(f"pandas with default engine load error: {ex}, try calamine instead")
 -                     file_like_object.seek(0)
 -                     df = pd.read_excel(file_like_object, engine='calamine')
 -                     return RAGFlowExcelParser._dataframe_to_workbook(df)
 -             except Exception as e_pandas:
 -                 raise Exception(f"pandas.read_excel error: {e_pandas}, original openpyxl error: {e}")
 - 
 -     @staticmethod
 -     def _clean_dataframe(df: pd.DataFrame):
 -         def clean_string(s):
 -             if isinstance(s, str):
 -                 return ILLEGAL_CHARACTERS_RE.sub(" ", s)
 -             return s
 - 
 -         return df.apply(lambda col: col.map(clean_string))
 - 
 -     @staticmethod
 -     def _dataframe_to_workbook(df):
 -         df = RAGFlowExcelParser._clean_dataframe(df)
 -         wb = Workbook()
 -         ws = wb.active
 -         ws.title = "Data"
 - 
 -         for col_num, column_name in enumerate(df.columns, 1):
 -             ws.cell(row=1, column=col_num, value=column_name)
 - 
 -         for row_num, row in enumerate(df.values, 2):
 -             for col_num, value in enumerate(row, 1):
 -                 ws.cell(row=row_num, column=col_num, value=value)
 - 
 -         return wb
 - 
 -     def html(self, fnm, chunk_rows=256):
 -         file_like_object = BytesIO(fnm) if not isinstance(fnm, str) else fnm
 -         wb = RAGFlowExcelParser._load_excel_to_workbook(file_like_object)
 -         tb_chunks = []
 -         for sheetname in wb.sheetnames:
 -             ws = wb[sheetname]
 -             rows = list(ws.rows)
 -             if not rows:
 -                 continue
 - 
 -             tb_rows_0 = "<tr>"
 -             for t in list(rows[0]):
 -                 tb_rows_0 += f"<th>{t.value}</th>"
 -             tb_rows_0 += "</tr>"
 - 
 -             for chunk_i in range((len(rows) - 1) // chunk_rows + 1):
 -                 tb = ""
 -                 tb += f"<table><caption>{sheetname}</caption>"
 -                 tb += tb_rows_0
 -                 for r in list(
 -                     rows[1 + chunk_i * chunk_rows: 1 + (chunk_i + 1) * chunk_rows]
 -                 ):
 -                     tb += "<tr>"
 -                     for i, c in enumerate(r):
 -                         if c.value is None:
 -                             tb += "<td></td>"
 -                         else:
 -                             tb += f"<td>{c.value}</td>"
 -                     tb += "</tr>"
 -                 tb += "</table>\n"
 -                 tb_chunks.append(tb)
 - 
 -         return tb_chunks
 - 
 -     def __call__(self, fnm):
 -         file_like_object = BytesIO(fnm) if not isinstance(fnm, str) else fnm
 -         wb = RAGFlowExcelParser._load_excel_to_workbook(file_like_object)
 - 
 -         res = []
 -         for sheetname in wb.sheetnames:
 -             ws = wb[sheetname]
 -             rows = list(ws.rows)
 -             if not rows:
 -                 continue
 -             ti = list(rows[0])
 -             for r in list(rows[1:]):
 -                 fields = []
 -                 for i, c in enumerate(r):
 -                     if not c.value:
 -                         continue
 -                     t = str(ti[i].value) if i < len(ti) else ""
 -                     t += (":" if t else "") + str(c.value)
 -                     fields.append(t)
 -                 line = "; ".join(fields)
 -                 if sheetname.lower().find("sheet") < 0:
 -                     line += " ——" + sheetname
 -                 res.append(line)
 -         return res
 - 
 -     @staticmethod
 -     def row_number(fnm, binary):
 -         if fnm.split(".")[-1].lower().find("xls") >= 0:
 -             wb = RAGFlowExcelParser._load_excel_to_workbook(BytesIO(binary))
 -             total = 0
 -             for sheetname in wb.sheetnames:
 -                 ws = wb[sheetname]
 -                 total += len(list(ws.rows))
 -             return total
 - 
 -         if fnm.split(".")[-1].lower() in ["csv", "txt"]:
 -             encoding = find_codec(binary)
 -             txt = binary.decode(encoding, errors="ignore")
 -             return len(txt.split("\n"))
 - 
 - 
 - if __name__ == "__main__":
 -     psr = RAGFlowExcelParser()
 -     psr(sys.argv[1])
 
 
  |